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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906415.1_cds_XP_016456579.1_50400
CDS Infomation

[gene=LOC107780541] [db_xref=GeneID:107780541] [protein=E3 ubiquitin protein ligase DRIP2-like] [protein_id=XP_016456579.1] [location=join(27991..28105,28943..29042,30977..31304,31434..31879,31980..32030,38067..38139,38556..38735)] [gbkey=CDS]
Sequence

ATGTCGAATCAAGCGGTGAAGGTGAGGAGGGACAGGATTGGGGCATGCATGACATGCCCT
CTTTGTCATAAACTCTTCAGAGATGCAACTACTATTTCCGAATGTCTTCATACGTTTTGC
AGGAAATGCATCTACAAAAAGTTGTCTGATGAAGAAACGGAACACTGTCCAATTTGCAAT
ATCGACTTAGGCTGTGTTCCTTTAGAGAAATTGAGGCCAGATCATAATCTGCAGGATGTG
AGAGCAAAGGTATTCCCTTATAAGAGGCGAAAGGTGAACGCACCTGAAATTATGCCTTCA
GTTGCATTGCCAGTAAGGAGAAAGGAGAGATCGCTCTCGTCACTTGTGGTCAGCACTCCA
AGAGTATCTACACAAACTGGAATGACAGGAAGAAGATCAAAATCGGTGGCAAGAAAAACA
TTACGGGGTTCTGCCTTTTCAATTGAGAAACCTGTCAAGAAAGAAGAAGGTTCTGGAGAA
GATCAGCTGGATAGCTCTAGCTCACCTGAGACTTTGAACAAGTTCACTCAGAACATAAGG
CTGAATTCTTCCAGTGGTGAGCCTTCTGACCACCCTACACCTGATAAGGAAATTGCGAAC
GGCAATAAACAGTGGGAAGGCAAACTTGATTTGTGGAAACCTTTAAATTGTTTGGTAGAA
GCAGCAAACAGGAGCAAATCTTCGAGGTTTACCTCACAGGGTTCTACCGCTAAGTCAGAA
GGTCTGCATTCTCATGACCGTGAGGGTCATGTCCGTAAAACTAAAGTCAAAGAACATGGG
CACAAATTGAAGATCAAGGATGATAATAATGGTGATCCTGGTCCTCAAGAATTTGATAAA
CCTAAGAAATCATGTAGAATTCGCCAAAAGAAGGCATCAGCTTTTGGAGAGTTTAATATT
TCACCGCAAACTGTACTGGATGCAACCAGTGCCAAATGTGAAAGGAGAATCTATCCAATA
TGGTTCTCATTAGTGGCCTTTGAAGACCAGGAGGGAGATGCACCCTTGCCACAGATTTCT
GCAAGTTACTTGAGAATAAAGGACGGTAACATTCCAGTTTCTTTCATCCAAAAATACCTG
GTGAGGAAGTTGGATCTTAAGAGCGAAGACGAGGTTGAGATTAGATGTATGGGACAATCA
ATAGCCCCCAGTTTACCACTTAACAGTTTGGTTGATATGTGGCTTCAAACTACTACATCT
GAAAGAATTCCAGCAATTATTGGTTCATCAGCAAAGGACTTTGTGATGGTATTGGCTTAT
GCTCGAAAGGTTCCAGGCGTTCCAGTTTCTTGA

Peptide Sequence

PEP ID

XP_016456579.1
PEP Infomation

PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Nicotiana tabacum]
Sequence

MSNQAVKVRRDRIGACMTCPLCHKLFRDATTISECLHTFCRKCIYKKLSDEETEHCPICN
IDLGCVPLEKLRPDHNLQDVRAKVFPYKRRKVNAPEIMPSVALPVRRKERSLSSLVVSTP
RVSTQTGMTGRRSKSVARKTLRGSAFSIEKPVKKEEGSGEDQLDSSSSPETLNKFTQNIR
LNSSSGEPSDHPTPDKEIANGNKQWEGKLDLWKPLNCLVEAANRSKSSRFTSQGSTAKSE
GLHSHDREGHVRKTKVKEHGHKLKIKDDNNGDPGPQEFDKPKKSCRIRQKKASAFGEFNI
SPQTVLDATSAKCERRIYPIWFSLVAFEDQEGDAPLPQISASYLRIKDGNIPVSFIQKYL
VRKLDLKSEDEVEIRCMGQSIAPSLPLNSLVDMWLQTTTSERIPAIIGSSAKDFVMVLAY
ARKVPGVPVS

Transcript Sequence

Gene sequence data has not been registered.